- Eagle Lake (Population: 1,320)
- Eagle Point (Population: 3,049)
- Eagle River (Population: 1,443)
- Eagle (Population: 3,117)
- East Troy (Population: 3,830)
- Easton (Population: 1,194)
- Eaton (Population: 761)
- Eau Claire (Population: 61,704)
- Edgar (Population: 1,386)
- Edgerton (Population: 4,933)
- Egg Harbor (Population: 1,194)
- Elba (Population: 1,086)
- Elcho (Population: 1,317)
- Eldorado (Population: 1,447)
- Elk Mound (Population: 1,121)
- Elk (Population: 1,183)
- Elkhart Lake (Population: 1,021)
- Elkhorn (Population: 7,305)
- Ellington (Population: 2,535)
- Ellsworth (Population: 2,909)
- Elm Grove (Population: 6,249)
- Elroy (Population: 1,578)
- Emmet (Population: 1,221)
- Empire (Population: 2,620)
- Erin (Population: 3,664)
- Ettrick (Population: 1,284)
- Eureka (Population: 1,338)
- Evansville (Population: 4,039)
- Evergreen (Population: 1,076)
- Excelsior (Population: 1,410)
- Exeter (Population: 1,261)
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